PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G410100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 175aa    MW: 19822.5 Da    PI: 10.0891
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G410100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66e-104989954
                       HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                        r RR+ri ++f  L++l+P       +K++ +++Le+A++Y+k L
  Aqcoe1G410100.1.p 49 ARERRHRISDRFKMLQSLVPGG-----TKMDTVSMLEEAIHYVKFL 89
                       699*****************87.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.324089IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-134597IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-124693IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.82E-144693No hitNo description
SMARTSM003531.1E-124695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.1E-74989IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MEYYNKPCSS SSNKKEIKKK KVVKKGSNNN KGSGGVTVKL STDPQSVAAR ERRHRISDRF  60
KMLQSLVPGG TKMDTVSMLE EAIHYVKFLK TQIWLHQTMM PSSFNNHHDN IDLDDPSLYY  120
HHLPSHQHTI CSSSSNTSLT PPTILPPSYI NGFHQGNDGH HHLHQNMLPY MSRK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010092808.16e-45hypothetical protein L484_012039
TrEMBLW9R2D36e-45W9R2D3_9R
STRINGVIT_08s0058g00110.t015e-39(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01310.15e-30APRATAXIN-like